Bayesian Model Averaging Library

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Documentation for package ‘BMS’ version 0.3.0

User Guides and Package Vignettes

Help Pages

A B C D E F G H I L M P Q S T V Z misc

-- --

BMS-package Bayesian Model Sampling 0.3.0

-- A --

as.zlm Extract a Model from a bma Object

-- B --

beta.draws.bma Coefficients of the Best Models
bin2hex Converting Binary Code to and from Hexadecimal Code
bma-class Class "bma"
BMS Bayesian Model Sampling 0.3.0
bms Bayesian Model Sampling and Averaging

-- C --

c.bma Concatenate bma objects
coef.bma Posterior Inclusion Probabilities and Coefficients from a 'bma' Object
combine_chains Concatenate bma objects

-- D --

datafls FLS (2001) growth data
density.bma Coefficient Marginal Posterior Densities
density.zlm Coefficient Marginal Posterior Densities
deviance.bma Posterior Variance and Deviance
deviance.zlm Posterior Variance and Deviance

-- E --

estimates.bma Posterior Inclusion Probabilities and Coefficients from a 'bma' Object

-- F --

f21hyper Gaussian Hypergeometric Function F(a,b,c,z)
fullmodel.ssq OLS Statistics for the Full Model Including All Potential Covariates

-- G --

gdensity Posterior Density of the Shrinkage Factor
gprior-class Class "gprior"

-- H --

hex2bin Converting Binary Code to and from Hexadecimal Code

-- I --

image.bma Plot Signs of Best Models
info.bma Summary Statistics for a 'bma' Object
is.bma Tests for a 'bma' Object
is.topmod Topmodel Object

-- L --

logLik.zlm Variable names and design matrix
lps.bma Log Predictive Score

-- M --

model.frame.bma Variable names and design matrix
mprior-class Class "mprior"

-- P --

plot.bma Plot Posterior Model Size and Model Probabilities
plot.pred.density Predictive Densities for bma Objects
plotComp Compare Two or More bma Objects
plotConv Plot Convergence of BMA Sampler
plotModelsize Plot Model Size Distribution
pmp.bma Posterior Model Probabilities
pmpmodel Posterior Model Probability for any Model
post.pr2 Posterior Variance and Deviance
post.var Posterior Variance and Deviance
pred.density Predictive Densities for bma Objects
pred.density-class Predictive Densities for bma Objects
predict.bma Predict Method for bma Objects
predict.zlm Predict Method for zlm Linear Model
print.bma Printing bma Objects
print.pred.density Predictive Densities for bma Objects
print.topmod Printing topmod Objects

-- Q --

quantile.coef.density Extract Quantiles from 'density' Objects
quantile.density Extract Quantiles from 'density' Objects
quantile.pred.density Extract Quantiles from 'density' Objects

-- S --

summary.bma Summary Statistics for a 'bma' Object
summary.zlm Summarizing Linear Models under Zellner's g

-- T --

topmod Topmodel Object
topmod-class Class "topmod"
topmodels.bma Model Binaries and their Posterior model Probabilities

-- V --

variable.names.bma Variable names and design matrix
variable.names.zlm Variable names and design matrix
vcov.zlm Variable names and design matrix

-- Z --

zlm Bayesian Linear Model with Zellner's g
zlm-class Class "zlm"

-- misc --

[.bma Extract Parts of a topmod Object
[.topmod Extract Parts of a topmod Object